..
    : MolMod is a collection of molecular modelling tools for python.
    : Copyright (C) 2007 - 2019 Toon Verstraelen <Toon.Verstraelen@UGent.be>, Center
    : for Molecular Modeling (CMM), Ghent University, Ghent, Belgium; all rights
    : reserved unless otherwise stated.
    :
    : This file is part of MolMod.
    :
    : MolMod is free software; you can redistribute it and/or
    : modify it under the terms of the GNU General Public License
    : as published by the Free Software Foundation; either version 3
    : of the License, or (at your option) any later version.
    :
    : MolMod is distributed in the hope that it will be useful,
    : but WITHOUT ANY WARRANTY; without even the implied warranty of
    : MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    : GNU General Public License for more details.
    :
    : You should have received a copy of the GNU General Public License
    : along with this program; if not, see <http://www.gnu.org/licenses/>
    :
    : --

Basic classes
=============

:mod:`molmod.molecules` -- Molecular systems
--------------------------------------------

Although the name of the class :class:`Molecule` is singular, it is equally
suitable for a cluster or complex with multiple molecules, or even a complete
unit cell of a periodic system.

.. automodule:: molmod.molecules
   :members:

:mod:`molmod.graphs` -- Abstract graphs
---------------------------------------

.. automodule:: molmod.graphs
   :members:

:mod:`molmod.molecular_graphs` -- Molecular graphs
--------------------------------------------------

This is an extension of the Graph object with molecular features.

.. automodule:: molmod.molecular_graphs
   :members:

:mod:`molmod.unit_cells` -- Periodic boundary conditions
--------------------------------------------------------

.. automodule:: molmod.unit_cells
   :members:

:mod:`molmod.transformations` Transformations in 3D
---------------------------------------------------

.. automodule:: molmod.transformations
   :members: