MD-Tracks documentation
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Introduction
============

MD-Tracks is a trajectory analysis toolkit for molecular dynamics and Monte
Carlo simulations. It is designed to interact with several simulation codes that
generate trajectory data: CP2K, CPMD, DLPOLY, GROMACS, LAMMPS. The trajectory
output files are first converted into a in a uniform binary format, which can
then be processed with a bundle of analysis scripts, e.g. for the analysis of
vibrational spectra, diffusion constants, radial distribution functions, and so
on.

If you use MD-tracks for your research or for the preparation of publications,
please cite the following paper: Verstraelen, T.; Van Houteghem, M.; Van
Speybroeck, V.; Waroquier, M. *J. Chem. Inf. Model.* **2008**, 48, 2414-2424.
(`http://dx.doi.org/10.1021/ci800233y <http://dx.doi.org/10.1021/ci800233y>`_).


Tutorial
========

.. toctree::
   :maxdepth: 2
   :numbered:

   tut_install
   tut_support
   tut_cite